The assembly of ribosomal RNA (rRNA) and ribosomal proteins (r-proteins) into ribosomal subunits (30S and 50S) is actually a complex process. Transcription of rRNA needs antitermination proteins and the main transcripts are processed by ribonucleases. R-proteins and rRNAs are chemically altered, the
Peptide bond formation and translational termination on the ribosome have been simulated by molecular mechanics, free energy perturbation, empirical valence bond (MD/FEP/EVB) and automated docking methods. Recent X-ray crystallographic data is used here to calculate the entire free energy surface for the
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